PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100173560001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family AP2
Protein Properties Length: 179aa    MW: 19904.7 Da    PI: 9.0782
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100173560001genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.75.2e-075678122
                           AP2  1 sgykGVrwdkkrgrWvAeIrd.p 22
                                  s+y+GV++++++gr++A+++d  
  Ote100173560001|100173560001 56 SQYRGVTRHRWTGRYEAHLWDnS 78
                                  78******************933 PP

2AP223.71.2e-071091362855
                           AP2  28 rkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +k  +lg+f t eeAa+a++ a+ k++g
  Ote100173560001|100173560001 109 NKDLYLGTFSTQEEAAEAYDIAAIKFRG 136
                                   599**********************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.73E-2056146No hitNo description
PROSITE profilePS5103219.32257144IPR001471AP2/ERF domain
SMARTSM003807.0E-3057150IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-1757145IPR001471AP2/ERF domain
PRINTSPR003674.3E-75869IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-11100146IPR016177DNA-binding domain
PRINTSPR003674.3E-7126146IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MSPGSQSSCV TGSQQIPAAA MADCVSLENK KRGAEKGDQK QIVHRKSIDT FGQRTSQYRG  60
VTRHRWTGRY EAHLWDNSYT INTAGXXXXX XXXXXXXXXQ ARIGRVAGNK DLYLGTFSTQ  120
EEAAEAYDIA AIKFRGVNAV TNFDVSRYDV DRIMESNGLL PGEIARRSKD LIASSTENF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006579963.15e-56PREDICTED: AP2-like ethylene-responsive transcription factor ANT isoform X5
SwissprotQ389147e-38ANT_ARATH; AP2-like ethylene-responsive transcription factor ANT
TrEMBLA5B2G84e-74A5B2G8_VITVI; Putative uncharacterized protein
STRINGSolyc03g123430.2.15e-50(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1749024